McKmeans: A highly efficient multi-core k-means algorithm for clustering extremely large datasets. McKmeans supports clustering gene expression, exon array, and SNP data sets.
Please also see our corresponding publication:
Kraus JM, Kestler HA. A highly efficient multi-core algorithm for clustering extremely large datasets. BMC Bioinform 11(1): 169, 2010. https://doi.org/10.1186/1471-2105-11-169
Our paper "Constraining classifiers in molecular analysis: invariance and robustness" has been published in Journal of the Royal Society Interface.
Our paper "Measuring Mental Effort for Creating Mobile Data Collection Applications" has been published in International Journal of Environmental Research and Public Health.