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Medical Systems Biology

You are here:  Teaching > WS2019/2020 > Bioinformatics and Systems Biology (MolMed)

Bioinformatics and Systems Biology (MolMed)

Coordinator: Prof. Dr. H. A. Kestler

Code: MOME.Ma1002

 


Announcement:

Start of lectures:

Tuesday, 22.10.2019 (14:00 - 16:00)

 

Room changes:

Thursday, 24.10.2019 (16:00 - 18:00): O29, 3004

Tuesday, 31.10.2019 (14:00 - 16:00): O29, 3005/3006

Thursday, 28.11.2019 (14:00 - 16:00): O23, 2609/10

 

Lectures:

Tuesday (14:00 - 16:00): seminar room surgical clinic 3.391 

Thursday (14:00 - 16:00): O23, 2611 

 

Exercises:

Thursday (16:00 - 18:00): O29, 3005/3006

 

Exam:

The post-exam review will take place on 11.02.2020 (12:00-13:00) in room O29/2003.


Friday, 07.02.2020 (10:00 - 12:00): Hörsaal Chirurgie (Lecture Hall Surgery)

 

Slides:

Introduction

Signalling

Epigenetics

Programming with R and Bioconductor

Multivariate Statistics

Data Mining

High throughput technologies

Mass spectrometry and Proteomics - basics

Bioinformatics in MS based qualitative and quantitative proteomics

Mass spectrometry and Proteomics - NewDrugs

Sequence Analysis

Sequence Analysis - Manuscript

Simulation and modeling

Mathematical analysis of cell function

Boolean Networks

Qualitative Models Extensions

Quantitive Models

Exercise sheets:

Exercise sheet 1

Exercise sheet 2

Exercise sheet 3

Exercise sheet 4

Exercise sheet 5

Exercise sheet 6

Exercise sheet 7

Exercise sheet 8

Additional material:

Time table

R Cheat sheet

Exercise sheet 1: data_Sha_64.txt

Exercise sheet 2: multivariate_statistics.RData

Exercise sheet 2: knn.Data.RData

Exercise sheet 4: Exercises-2019.mgf

Latest News

 

Our paper "Constraining classifiers in molecular analysis: invariance and robustness" has been published in Journal of the Royal Society Interface.

 

Our paper "Two-Stream Attention Network for Pain Recognition from Video Sequences" has been published in Sensors (Basel).