Medical Systems Biology

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Einführung in die Bioinformatik (MolMed)

Dozent: Prof. Dr. Hans A. Kestler
  apl. Prof. Dr. Rainer Schuler
  mit Dr. Ludwig Lausser
Code

 

MOME.Ba5006

 

 

 

 


Aktuelles

Klausureinsicht: Freitag 15.03.2019 von 9:00 bis 10:00 Uhr in Raum N23/2622

Klausureinsicht: Freitag 1.03.2019 von 10:00 bis 11:00 Uhr in Raum O29/2006

 

Vorlesung

Dienstags 08:00 - 10:00 Uhr, N24:101


Übung

Dienstags 12:00 - 14:00 Uhr, O29:3001/3002 (16.10. - 23.10.)

Dienstags 12:00 - 14:00 Uhr, O29:3005/3006 (sonst)


Klausur

Freitag, den 15.2.2019, 10:00 Uhr (Hörsaal Klinik - Innere Medizin)

Nachklausur: Freitag, den 8.3.2019, 10:00 Uhr (O23:2609/2610)


Vorlesungsunterlagen

Organisatorisches

Einführung in R 1/2

Einführung in R 2/2

Datenstrukturen und Modelle

Algorithmen

Entwurfsmuster

Suchverfahren

Datenbanken I

Datenbanken II

Sequenzanalyse

Sequenzmuster

Datenanalyse

Clusteranalyse

Klassifikation


Übungsblätter

Blatt 1

Blatt 2

Blatt 3

Blatt 4

Blatt 5

Blatt 6

Blatt 7

Blatt 8

Blatt 9

Blatt 10

Blatt 11

Blatt 12


Sonstiges

Programmieren in R

R-Reference Card

database.RData

behandlungen.RData

hospitale.RData

dynProg.RData

multiples.RData

golub50train.RData

golub50test.RData


Zitieren

Um einen Journal-Artikel wiederzufinden müssen beim Zitieren mindestens die folgenden Angaben vorhanden sein: Autor(en) (für mehr als zwei Autoren kann man den Namen des Erstautors und et al. angeben), vollständigen Titel des Artikels, Journal Name (oder eine Abkürzung dessen), JahrVolumeAusgabe (number)Seite(n).

Job Openings

Wissenschaftlicher Mitarbeiter (m/w/d) 

 

Latest News

Our paper "Boolean network modeling and its integration with experimental read-outs: An interdiscipliary presentation using a leukemia model" has been published online first in Pathologie.

  1.  

    "Combined analysis of a serum mRNA/miRNA marker signature and CA 19-9 for timely and accurate diagnosis of recurrence after resection of pancreatic ductal adenocarcinoma: A prospective multicenter cohort study" has been published online first in the United European Gastroenterology Journal.

     

    "Identifications of Similarity Metrics for Patients With Cancer: Protocol for a Scoping Review" has been published in JMIR Research Protocols.

     

    "Recent Trends and Future Challenges in Learning from Data" has been published with Springer.

     

    Our paper "Permutation-invariant linear classifiers" has been published in Machine Learning.

     

    Our paper "Prediction of resistance to bevacizumab plus FOLFOX in metastatic colorectal cancer-Results of the prospective multicenter PERMAD trial" has been published in PLoS One.

     

  2. "Introducing a machine learning algorithm for delirium prediction—the Supporting SURgery with GEriatric Co-Management and AI project (SURGE-Ahead)has been published in Age and Ageing.

Our paper "Segmentation-based cardiomegaly detection based on semi-supervised estimation of cardiothoracic ratio" has been published in Scientific Reports.

 

"Prospective study validating a multidimensional treatment decision score predicting the 24-month outcome in untreated patients with clinically isolated syndrome and early relapsing–remitting multiple sclerosis, the ProVal-MS study" has been published in Neurological Research and Practice.

 

Our paper "GatekeepR: an R shiny application for the identification of nodes with high dynamic impact in boolean networks" has been published online first in Bioinformatics.

 

Our paper "The Necessity of Interoperability to Uncover the Full Potential of Digital Health Devices" has been published in JMIR Medical Informatics.

 

"Multicentric pilot study to standardize clinical whole exome sequencing (WES) for cancer patients" has been published in npj Precision Oncology.

 

Our paper "AMBAR-interactive alteration annotations for molecular tumor boards" has been published in Computer Methods and Programs in Biomedicine.

 

"A protocol for the use of cloud-based quantum computers for logical network analysis of biological systems" has been published in STAR Protocols.

 

Our paper "A systems biology approach to define mechanisms, phenotypes, and drivers in PanNETs with a personalized perspective" has been published in npj systems biology and applications.

 

"Supporting SURgery with GEriatric Co-Management and AI (SURGE-Ahead): A study protocol for the development of a digital geriatrician" has been published in PLoS One.

 

"Self-Assessment of Having COVID-19 With the Corona Check Mhealth App" has been published in IEEE Journal of Biomedical and Health Informatics.


Our first quantum computing paper "Leveraging quantum computing for dynamic analyses of logical networks in systems biology" has been published in Patterns.