Medical Systems Biology

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COVID-19 Software

CTest

A secure and rapid query-software for COVID-19 test results that can easily be integrated into the clinical workflow to avoid communication overload

IgTest

A modified version of CTest: A secure and rapid query-software for COVID-19 Ig results that can easily be integrated into the clinical workflow.

SARS-CoV2-Monitor

Shiny data analysis visualizing Covid-19 infection data. Illustrates cases/deaths per country, growth rate, etc. Data is obtained from Johns Hopkins University’s CSEGIS data repository.

Bed capacity dashboard

Interactive web dashboard to show realtime changes of bed capacites. Based on wekan (https://wekan.github.io/), extended with functionality for printing, exporting and automatic calculation of bed capacities.

Corona Check App

Anonymous Corona self-assessment, tips and news. You can perform Corona Check for yourself or your relatives for early detection of COVID-19. The criteria for this are based on the specifications of the Robert Koch Institute and are updated regularly. You can use this app again at any time.

CoCoV

A mobile application to track adverse events after COVID-19 vaccination.

Job Openings

Wissenschaftlicher Mitarbeiter (m/w/d) 

 

Latest News

 

  1. Our paper "Prediction of resistance to bevacizumab plus FOLFOX in metastatic colorectal cancer-Results of the prospective multicenter PERMAD trial" has been published in PLoS One.

     

  2. "Introducing a machine learning algorithm for delirium prediction—the Supporting SURgery with GEriatric Co-Management and AI project (SURGE-Ahead)has been published in Age and Ageing.

Our paper "Segmentation-based cardiomegaly detection based on semi-supervised estimation of cardiothoracic ratio" has been published in Scientific Reports.

 

"Prospective study validating a multidimensional treatment decision score predicting the 24-month outcome in untreated patients with clinically isolated syndrome and early relapsing–remitting multiple sclerosis, the ProVal-MS study" has been published in Neurological Research and Practice.

 

Our paper "GatekeepR: an R shiny application for the identification of nodes with high dynamic impact in boolean networks" has been published online first in Bioinformatics.

 

Our paper "The Necessity of Interoperability to Uncover the Full Potential of Digital Health Devices" has been published in JMIR Medical Informatics.

 

"Multicentric pilot study to standardize clinical whole exome sequencing (WES) for cancer patients" has been published in npj Precision Oncology.

 

Our paper "AMBAR-interactive alteration annotations for molecular tumor boards" has been published in Computer Methods and Programs in Biomedicine.

 

"A protocol for the use of cloud-based quantum computers for logical network analysis of biological systems" has been published in STAR Protocols.

 

Our paper "A systems biology approach to define mechanisms, phenotypes, and drivers in PanNETs with a personalized perspective" has been published in npj systems biology and applications.

 

"Supporting SURgery with GEriatric Co-Management and AI (SURGE-Ahead): A study protocol for the development of a digital geriatrician" has been published in PLoS One.

 

"Self-Assessment of Having COVID-19 With the Corona Check Mhealth App" has been published in IEEE Journal of Biomedical and Health Informatics.


Our first quantum computing paper "Leveraging quantum computing for dynamic analyses of logical networks in systems biology" has been published in Patterns.