Medical Systems Biology

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Praktische Algorithmen der Bioinformatik und Computerlinguistik mit Lisp

PD Dr. Hans A. Kestler und Dr. Tilman Becker (DFKI)
mit Dr. Markus Maucher, Dipl.-Inf. Johann M. Kraus, Dipl.-Inf. Gunnar Völkel und Dipl.-Inf. Ludwig Lausser

Veranstaltungsnummer: CS8095.000

Vorlesungsbegleitende Unterlagen

1. Vorlesungszeiten und Ankündigung

  • Blockveranstaltung: 08.- 12. April 2013, 9:30-18:00 Uhr, Raum O27/121
  • Klausur: 07. Juni 2013, 14 Uhr, Raum O27H20
  • Dauer: 1 Stunde. Keine Hilfsmittel zugelassen.
  • Die Nachklausur wird geschlossen stattfinden, d.h. ein Erstversuch bei der Nachklausur wird nicht möglich sein.
  • Klausureinsicht: Di, 11. Juni 2013, 11-12 Uhr, Raum O27/532

 

  • Hinweise zur Klausur:

Für die Klausur sollte man in Lisp funktionales, imperatives und objekt-orientiertes Programmieren sowie die in der Vorlesung behandelten Konzepte von Lisp beherrschen.
Detaillierte Kenntnisse der umfangreicheren Beispiele, wie zum Beispiel das Simulationsbeispiel, sind nicht nötig.

 

2. Inhalt und Themen

Die Veranstaltung vermittelt Algorithmen der funktionalen Programmierung in Lisp im Hinblick auf die Anwendungsgebiete Bioinformatik und Computerlinguistik.

Job Openings

Wissenschaftlicher Mitarbeiter (m/w/d) 

 

Latest News

 

Our paper "Segmentation-based cardiomegaly detection based on semi-supervised estimation of cardiothoracic ratio" has been published in Scientific Reports.

 

"Prospective study validating a multidimensional treatment decision score predicting the 24-month outcome in untreated patients with clinically isolated syndrome and early relapsing–remitting multiple sclerosis, the ProVal-MS study" has been published in Neurological Research and Practice.

 

Our paper "GatekeepR: an R shiny application for the identification of nodes with high dynamic impact in boolean networks" has been published online first in Bioinformatics.

 

Our paper "The Necessity of Interoperability to Uncover the Full Potential of Digital Health Devices" has been published in JMIR Medical Informatics.

 

"Multicentric pilot study to standardize clinical whole exome sequencing (WES) for cancer patients" has been published in npj Precision Oncology.

 

Our paper "AMBAR-interactive alteration annotations for molecular tumor boards" has been published in Computer Methods and Programs in Biomedicine.

 

"A protocol for the use of cloud-based quantum computers for logical network analysis of biological systems" has been published in STAR Protocols.

 

Our paper "A systems biology approach to define mechanisms, phenotypes, and drivers in PanNETs with a personalized perspective" has been published in npj systems biology and applications.

 

"Supporting SURgery with GEriatric Co-Management and AI (SURGE-Ahead): A study protocol for the development of a digital geriatrician" has been published in PLoS One.

 

"Self-Assessment of Having COVID-19 With the Corona Check Mhealth App" has been published in IEEE Journal of Biomedical and Health Informatics.


Our first quantum computing paper "Leveraging quantum computing for dynamic analyses of logical networks in systems biology" has been published in Patterns.