Medical Systems Biology

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Einführung in die Bioinformatik (Informatik und Mathematische Biometrie)

PD Dr. Hans A. Kestler, Dr. Karlheinz Holzmann,
Dr. Markus Maucher, Dipl.-Inf. Johann M. Kraus
mit Florian Schmid (Übungsleiter)

Veranstaltungsnummer: CS6012.000 und MED 90052


Vorlesungsunterlagen

1. Vorlesungszeiten und Ankündigungen

  •     Vorlesung: Mittwochs, 8:30-10:00 Uhr, Raum 123, O27
  •     Übung: Freitags, 14:00-16:00 Uhr, Raum 121, O27

 

  •     Klausurtermine:

    Sa. 23.02.13, 10.15 - 11.15 Uhr, H15
    Sa. 13.04.13, 10.00 - 11.00 Uhr, H20
    Es handelt sich um eine geschlossene Klausur.

  •     Besichtigung der Chip-Facility:

    Mittwoch 16.01.13
    Gruppe 1: 8.30-9.15 Uhr
    Gruppe 2: 9.15-10.00 Uhr

    Treffpunkt:
    Eingang des Zentrums für Biomedizinische Forschung
    (Früher ZKF - Zentrum Klinische Forschung)
    Helmholzstr. 8/1
    Lageplan

  •     Klausureinsicht:

    Mo. 25.02.13, 11.00 - 12.00 Uhr, O27/4303
    Mo. 25.02.13, 14.00 - 15.00 Uhr, O27/4303



2. Inhalt und Themen


Die Veranstaltung vermittelt Grundkenntnisse der Bioinformatik im Hinblick auf künftige Tätigkeitsfelder von (Medizin-) Informatikern im Bereich der molekularen Medizin und Biotechnologie. Es sollen Grundlagen und praktisch verwendbare Kenntnisse und Fähigkeiten vermittelt werden, die es erlauben DNA- und Proteinsequenzen zu vergleichen und zu analysieren, sowie Modelle zu entwickeln.

Latest News

 

Our first quantum computing paper "Leveraging quantum computing for dynamic analyses of logical networks in systems biology" has been published in Patterns.

 

Our paper "Unsupervised domain adaptation for the detection of cardiomegaly in cross-domain chest X-ray images" has been published in Frontiers in Artificial Intelligence.

 

  1. "The HLA ligandome of oropharyngeal squamous cell carcinomas reveals shared tumour-exclusive peptides for semi-personalised vaccination" has been published online first in the British Journal of Cancer.

 

"Vaccine Side Effects in Health Care Workers after Vaccination against SARS-CoV-2: Data from TüSeRe:exact Study" has been published in Viruses-Basel.

 

"PREDICT-juvenile-stroke: PRospective evaluation of a prediction score determining individual clinical outcome three months after ischemic stroke in young adults – a study protocol" has been published in BMC Neurology.

 

Our paper "Federated Electronic Data Capture (fEDC): Architecture and Prototype" has been accepted for publiaction in the Journal of Biomedical Informatics.

 

Our paper "Efficient cross-valdation traversals in feature subset selection" has been published in Scientific Reports.

 

Our paper "CANTATA - prediction of missing links in Boolean networks using genetic programming" has been published in Bioinformatics.

 

Our paper "Interaction Empowerment in Mobile Health: Concepts, Challenges, and Perspectives" has been published in the Journal of Medical Internet Research mhealth and uhealth.

 

Our paper "Identification of dynamic driver sets controlling phenotypical landscapes" has been published in the Computational and Structural Biotechnology Journal.


Congratulations to Dr. Silke Werle for winning the 1st Prize with her pitch at the 1. Science Day held by ProTrainU. 

 

Our paper "Reconstructing Boolean network ensembles from single-cell data for unraveling dynamics in the aging of human hematopoietic stem cells" has been published in the Computational and Structural Biotechnology Journal.

 

The position paper "Is there a role for statistics in artificial intelligence" has been published online first in Advances in Data Analysis and Classification.