Medical Systems Biology

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Proseminar Bioinformatik und Systembiologie

PD Dr. Hans A. Kestler, Dr. Markus Maucher, Dipl.-Inf. Ludwig Lausser

Proseminar begleitende Unterlagen

 

1. Termine und Ankündigung

  • Vorbesprechung: 16.4.2013, 14:00 Uhr, Raum O27/429
  • Vorträge: Der erste Vortrag findet am 14.5.2013 statt (14:00 Uhr, Raum O27/429).

    11.06. Next Generation Sequencing (Tobias Badura)

  • Besichtigung der Genomics-Facility:

    Di. 21.05.2013 um 14:00 Uhr
    Treffpunkt: Eingang zum Zentrum für Biomedizinische (früher ZKF - Zentrum für klinische Forschung)

2. Inhalt und Themen

Die Studierenden sollen die grundlegenden Zusammenhänge und Herausforderungen aus dem Bereich der Bioinformatik und Systembiologie verstehen. Darüber hinaus sollen die Studierenden das selbstständige Arbeiten in einem wissenschaftlichen Themengebiet erlernen.

  • DNA Sequenzanalyse (mit Themen zum Sequenzvergleich, dem Assemblieren von Sequenzen, der Genvorhersage, etc.)
  • RNA Strukturvorhersage, Auswertung von Microarrays, etc.
  • Methoden des maschinellen Lernens (Klassifikation, Clustering, etc.)
  • Systembiologie (Modellierung mit Booleschen Netzwerken, Bayessche Netze, Netzwerkvergleich, Eigenschaften biologischer Graphen, etc.)

Job Openings

Wissenschaftlicher Mitarbeiter (m/w/d) 

 

Latest News

 

Our paper "A systems biology approach to define mechanisms, phenotypes, and drivers in PanNETs with a personalized perspective" has been published in npj systems biology and applications.

 

"Supporting SURgery with GEriatric Co-Management and AI (SURGE-Ahead): A study protocol for the development of a digital geriatrician" has been published in PLoS One.

 

"Self-Assessment of Having COVID-19 With the Corona Check Mhealth App" has been published in IEEE Journal of Biomedical and Health Informatics.


Our first quantum computing paper "Leveraging quantum computing for dynamic analyses of logical networks in systems biology" has been published in Patterns.

 

Our paper "Unsupervised domain adaptation for the detection of cardiomegaly in cross-domain chest X-ray images" has been published in Frontiers in Artificial Intelligence.

 

  1. "The HLA ligandome of oropharyngeal squamous cell carcinomas reveals shared tumour-exclusive peptides for semi-personalised vaccination" has been published online first in the British Journal of Cancer.

 

"Vaccine Side Effects in Health Care Workers after Vaccination against SARS-CoV-2: Data from TüSeRe:exact Study" has been published in Viruses-Basel.

 

"PREDICT-juvenile-stroke: PRospective evaluation of a prediction score determining individual clinical outcome three months after ischemic stroke in young adults – a study protocol" has been published in BMC Neurology.

 

Our paper "Federated Electronic Data Capture (fEDC): Architecture and Prototype" has been accepted for publiaction in the Journal of Biomedical Informatics.

 

Our paper "Efficient cross-valdation traversals in feature subset selection" has been published in Scientific Reports.

 

Our paper "CANTATA - prediction of missing links in Boolean networks using genetic programming" has been published in Bioinformatics.

 

Our paper "Interaction Empowerment in Mobile Health: Concepts, Challenges, and Perspectives" has been published in the Journal of Medical Internet Research mhealth and uhealth.

 

Our paper "Identification of dynamic driver sets controlling phenotypical landscapes" has been published in the Computational and Structural Biotechnology Journal.