Medical Systems Biology

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Einführung in die Bioinformatik

Dr. Hans A. Kestler, Prof. Enno Ohlebusch
mit Dr. Karlheinz Holzmann

Übungsleiter: Dipl.-Inf. Johann M. Kraus

Vorlesungsunterlagen

1. Vorlesungszeiten und Ankündigung

  • Vorlesung: Mittwochs, 8:30-10:00 Uhr, Raum 123, O27
  • Übung: Mittwochs, 16:30-18:00 Uhr Raum 3211
  • Besichtigung der Chip-Facility am Mi. 13.01.10

 

  • Prüfungstermine:

    Di. 23.02.10, 10.00 - 11.00 Uhr, H21
    Fr. 26.03.10, 10.00 - 11.00 Uhr, H21

  • Klausureinsicht:

    Mi. 24.02.10, 10.00 - 11.00 Uhr, N27/2.074
    Fr. 26.02.10, 14.00 - 15.00 Uhr, N27/2.074

2. Inhalt und Themen


Die Veranstaltung vermittelt Grundkenntnisse der Bioinformatik im Hinblick auf künftige Tätigkeitsfelder von (Medizin-) Informatikern im Bereich der molekularen Medizin und Biotechnologie. Es sollen Grundlagen und praktisch verwendbare Kenntnisse und Fähigkeiten vermittelt werden, die es erlauben DNA- und Proteinsequenzen zu vergleichen und zu analysieren, sowie Modelle zu entwickeln.

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Wissenschaftlicher Mitarbeiter (m/w/d) 

 

Latest News

 

  1. Our paper "Prediction of resistance to bevacizumab plus FOLFOX in metastatic colorectal cancer-Results of the prospective multicenter PERMAD trial" has been published in PLoS One.

     

  2. "Introducing a machine learning algorithm for delirium prediction—the Supporting SURgery with GEriatric Co-Management and AI project (SURGE-Ahead)has been published in Age and Ageing.

Our paper "Segmentation-based cardiomegaly detection based on semi-supervised estimation of cardiothoracic ratio" has been published in Scientific Reports.

 

"Prospective study validating a multidimensional treatment decision score predicting the 24-month outcome in untreated patients with clinically isolated syndrome and early relapsing–remitting multiple sclerosis, the ProVal-MS study" has been published in Neurological Research and Practice.

 

Our paper "GatekeepR: an R shiny application for the identification of nodes with high dynamic impact in boolean networks" has been published online first in Bioinformatics.

 

Our paper "The Necessity of Interoperability to Uncover the Full Potential of Digital Health Devices" has been published in JMIR Medical Informatics.

 

"Multicentric pilot study to standardize clinical whole exome sequencing (WES) for cancer patients" has been published in npj Precision Oncology.

 

Our paper "AMBAR-interactive alteration annotations for molecular tumor boards" has been published in Computer Methods and Programs in Biomedicine.

 

"A protocol for the use of cloud-based quantum computers for logical network analysis of biological systems" has been published in STAR Protocols.

 

Our paper "A systems biology approach to define mechanisms, phenotypes, and drivers in PanNETs with a personalized perspective" has been published in npj systems biology and applications.

 

"Supporting SURgery with GEriatric Co-Management and AI (SURGE-Ahead): A study protocol for the development of a digital geriatrician" has been published in PLoS One.

 

"Self-Assessment of Having COVID-19 With the Corona Check Mhealth App" has been published in IEEE Journal of Biomedical and Health Informatics.


Our first quantum computing paper "Leveraging quantum computing for dynamic analyses of logical networks in systems biology" has been published in Patterns.