AVAtar

Pareto-optimal balancing conflicting objectives in genome subgroup analysis.

AVAtar is a readily usable standalone software for analysis and visualisation of alteration data. AVAtar features interactively customizable alteration plots, extensive data import capabilities and a multi-objective optimization algorithm to find alteration patterns,  e.g. gene sets with mutually exclusive alterations or small gene sets with high sample coverage.

The software is available at

https://github.com/sysbio-bioinf/avatar