Medical Systems Biology

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Bioinformatics and Systems Biology (MolMed)

Coordinator: Prof. Dr. H. A. Kestler

Code: MOME.Ma1002

 


Announcement:


The post-exam review will take place on Friday, 15.02.2019, 12:00-13:00 at the office of Katharina Schilberg (O29, 2007).


The second post-exam review will take place on Monday, 15.03.2019, 12:00-13:00 at the office of Katharina Schilberg (O29, 2007).

 

Lectures:

Tuesday, 23.10. - 27.11. (14:00 - 16:00) Seminar room Surgical Clinic 3.391 

Tuesday, 04.12. - 18.12. (14:00 - 16:00) O29, 2004 

Thursday (14:00 - 16:00) Room O23, 2611

 

Slides:

  1. Signalling
  2. Epigenetics
  3. Programming with R and Bioconductor
  4. Multivariate Statistics
  5. Data Mining
  6. Clustering
  7. Next Generation Sequencing
  8. Mass spectrometry and Proteomics in Drug Discovery
  9. Bioinformatics in MS based qualitative and quantitative proteomics
  10. Sequence Alignment - Slides
  11. Sequence Alignment - Script
  12. Simulation and Modeling of Biological Processes
  13. Boolean Networks
  14. Qualitative Models Extensions
  15. Qualitative Models Inference
 

Excercises:

Thursday (16:00 - 18:00) Room O29, 3005/3006

 

Exercise sheet 1

Exercise sheet 2

Exercise sheet 3

Exercise sheet 4

Exercise sheet 5

Exercise sheet 6

Exercise sheet 7

Exam:

Friday, 08.02.2019 (14:00 - 16:00) room: Hörsaal Chirurgie (N23, 2 01000)

 

Additional material:

  1. Schedule
  2. knn.data.RData
  3. clustering.data.RData
  4. Patient_6661.zip
  5. CUPro06323.mgf 

Latest News

 

Our paper "Assessing phenotype order in molecular data" has been published in Scientific Reports.

 

Our paper "Representing dynamic biological networks with multi-scale probabilistic models"has been published in Communications Biology.